Create_gseParam: Create param for gse analysis

In xiayh17/RNAseqStat2: A Pipeline to Process RNAseq Data

Create param for gse analysis

Description

Create param for gse analysis

Usage

Create_gseParam(
  goParam = NULL,
  keggParam = NULL,
  customGO = FALSE,
  customKEGG = FALSE,
  skipGO = FALSE,
  skipKEGG = FALSE
)

Arguments

goParam	arguments in gseGO or GSEA except geneList.
keggParam	arguments in gseKEGG or GSEA except geneList.
customGO	logic. FALSE for gseGO, TRUE for GSEA
customKEGG	logic. FALSE for gseKEGG, TRUE for GSEA
skipGO	logical, set parameters as NULL for skip this step
skipKEGG	logical, set parameters as NULL for skip this step

Value

gseParam

Examples

Create_gseParam()

xiayh17/RNAseqStat2 documentation built on May 27, 2023, 12:13 p.m.