Create_treatInfo: Function for treatInfo

In xiayh17/RNAseqStat2: A Pipeline to Process RNAseq Data

Function for treatInfo

Description

Function for treatInfo

Usage

Create_treatInfo(
  cutFC = NULL,
  cutFDR = 0.05,
  label = c("Down", "Stable", "Up"),
  label_ns = "Stable",
  sigCol = c("#2874C5", "grey", "#f87669"),
  sigAlpha = c(1, 0.5, 1),
  sigSize = c(0.6, 0.5, 0.6),
  sigShape = 16
)

Arguments

cutFC	a numeric or list. Threshold of logFC for finding significantly different genes.
cutFDR	a numeric. Threshold of Pvalue for finding significantly different genes.
label	a character vector. Name for every group
label_ns	a character. Name of no signification group
sigCol	a character vector. sigColor of every group
sigAlpha	a numeric vector. transparency for every group

Value

treatInfo

xiayh17/RNAseqStat2 documentation built on May 27, 2023, 12:13 p.m.