GSEAplot: plot gseKEGG plot
In xiayh17/RNAseqStat2: A Pipeline to Process RNAseq Data
View source: R/Visualization_gse.R
GSEAplot R Documentation
plot gseKEGG plot
Description
plot gseKEGG plots by up and down
Usage
GSEAplot(res, top = 10)
Arguments
res
output from gse
top
filter top by pvalue
pvalue_cut
filter cut of pvalue
enrichmentScore_cut
filter cut of enrichmentScore
Value
a list contains up and down
Examples
## Not run:
gsekegg_res <- enrich_gsekegg(DEG_df,x = "log2FoldChange")
plots_l <- enhance_gseplot(gsekegg_res)
## End(Not run)
xiayh17/RNAseqStat2 documentation built on May 27, 2023, 12:13 p.m.
R Package Documentation
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View source: R/Visualization_gse.R
| GSEAplot | R Documentation |
plot gseKEGG plot
Description
plot gseKEGG plots by up and down
Usage
GSEAplot(res, top = 10)
Arguments
res |
output from gse |
top |
filter top by pvalue |
pvalue_cut |
filter cut of pvalue |
enrichmentScore_cut |
filter cut of enrichmentScore |
Value
a list contains up and down
Examples
## Not run:
gsekegg_res <- enrich_gsekegg(DEG_df,x = "log2FoldChange")
plots_l <- enhance_gseplot(gsekegg_res)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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