tss <- function(x, u, v, m, t=NULL, eta, tidx="f"){
if(missing(x))
stop("Missing input argument. A ppclust object or a numeric data set is required")
tidx <- match.arg(tidx, c("e","f","g"))
if(inherits(x, "ppclust")){
X <- as.matrix(x$x)
if(!is.null(x$u)){
U <- as.matrix(x$u)
m <- x$m
}
else if(!is.null(x$t)){
U <- as.matrix(x$t)
m <- x$eta
}
else{
stop("Argument 'x' does not have the fuzzy membership or typicality matrix")
}
V <- as.matrix(x$v)
D <- as.matrix(x$d)
if(tidx == "e" || tidx == "g"){
if(!is.null(x$t)){
T <- x$t
eta <- x$eta
}
else
stop("Argument 'x' does not have the typicality matrix")
}
dcheck <- FALSE
}
else{
dcheck <- TRUE
if(!missing(x))
if(is.matrix(x) || is.data.frame(x) || is.vector(x))
X <- as.matrix(x)
else
stop("Argument 'x' must be a valid instance of the 'ppclust', a numeric vector, data frame or matrix")
else
stop("Missing argument 'x'")
if(!missing(u))
if(is.matrix(u) || is.data.frame(u))
U <- as.matrix(u)
else
stop("Argument 'u' must be a numeric data frame or matrix")
else
stop("Missing argument 'u'")
if(!missing(v))
if(is.matrix(v) || is.data.frame(v))
V <- as.matrix(v)
else
stop("Argument 'v' must be a numeric data frame or matrix")
else
stop("Missing argument 'v'")
if(tidx != "f")
if(!is.null(t))
if(is.matrix(t) || is.data.frame(t))
T <- as.matrix(t)
else
stop("Argument 't' must be a numeric data frame or matrix")
else
stop("Argument 't' is null")
if(tidx == "e"){
if(missing(eta))
eta <- 2
if(!is.numeric(eta))
stop("Argument 'eta' must be number")
if(eta < 1)
stop("Argument 'eta' should be a positive number equals to or greater than 1")
}
if(missing(m))
m <- 2
if(!is.numeric(m))
stop("Argument 'm' must be number")
if(m < 1)
stop("Argument 'm' should be a positive number equals to or greater than 1")
}
if(nrow(X) != nrow(U))
stop("The number of rows of data set is not equal to the number of rows of the membership matrix")
if(ncol(X) != ncol(V))
stop("The number of columns of the data set matrix is not equal to the number of columns of prototypes matrix")
if(ncol(U) != nrow(V))
stop("The number of columns of the membership matrix is not equal to the number of rows of prototypes matrix")
if(tidx == "g"){
if(!is.null(T))
U <- T/rowSums(T)
else
stop("Typicality matrix is required to compute the generalized ts index")
}
n <- nrow(U)
k <- ncol(U)
if(dcheck){
D <- matrix(nrow = n, ncol = k, 0)
for(i in 1:n)
for(j in 1:k)
D[i,j] <- sum((X[i,]-V[j,])^2)
}
minv <- Inf
totdiffv <- as.double(0)
for(i in 1:(k-1))
for(j in (i+1):k)
totdiffV = totdiffv + sum((V[i,]-V[j,])^2)
if(sum((V[i,]-V[j,])^2) < minv)
minv <- sum((V[i,]-V[j,])^2)
if(tidx == "e")
idx <- (sum(((U)^m+(T)^eta)*D)+totdiffv/(k*(k-1)))/(minv + 1/k)
else
idx <- (sum((U^m)*D)+totdiffv/(k*(k-1)))/(minv + 1/k)
if(tidx == "f")
names(idx) <- "tss"
else if(tidx == "e")
names(idx) <- "tss.e"
else if(tidx == "g")
names(idx) <- "tss.g"
return(idx)
}
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