handle_progeny_scores: Handling the progeny scores (proportion adjustments,...
In zcollest/scRegNetwrapper: Wrapper functions for single cell regulatory network analysis (DoRothEA, PROGENy, pySCENIC) as well as tools for downstream analysis and method comparisons.
Description
Usage
Arguments
Examples
View source: R/handle_progeny_scores.R
Description
Takes a Seurat object and produces a list of data frames that are necessary for downstream analysis
Usage
1
handle_progeny_scores(seurat_obj, comparison_feature, assay_name = NULL)
Arguments
seurat_obj
seurat object
comparison_feature
which metadata feature do you want to do comparisons for?
assay_name
if using custom TFs, what's the assay name?
Examples
1
handle_progeny_scores(pnmc10k,30)
zcollest/scRegNetwrapper documentation built on Dec. 23, 2021, 9:14 p.m.
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Description Usage Arguments Examples
View source: R/handle_progeny_scores.R
Description
Takes a Seurat object and produces a list of data frames that are necessary for downstream analysis
Usage
1 | handle_progeny_scores(seurat_obj, comparison_feature, assay_name = NULL)
|
Arguments
seurat_obj |
seurat object |
comparison_feature |
which metadata feature do you want to do comparisons for? |
assay_name |
if using custom TFs, what's the assay name? |
Examples
1 | handle_progeny_scores(pnmc10k,30)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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