plot_RSS: Uses reticulate package to plot RSS using python
In zcollest/scRegNetwrapper: Wrapper functions for single cell regulatory network analysis (DoRothEA, PROGENy, pySCENIC) as well as tools for downstream analysis and method comparisons.
Description
Usage
Arguments
Examples
Description
Plot RSS
Usage
1
Arguments
cellAnnot
cell annotations from pyscenic (one of the outputs of the handle_pyscenic_results() function)
rss_cellType
regulon specificity scores by cell type / comparison feature (one of the outputs of the handle_pyscenic_results() function)
Examples
1
plot_RSS(cellAnnot, rss_cellType)
zcollest/scRegNetwrapper documentation built on Dec. 23, 2021, 9:14 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Examples
Description
Plot RSS
Usage
1 |
Arguments
cellAnnot |
cell annotations from pyscenic (one of the outputs of the |
rss_cellType |
regulon specificity scores by cell type / comparison feature (one of the outputs of the |
Examples
1 | plot_RSS(cellAnnot, rss_cellType)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.