Description Usage Arguments Value Author(s) See Also Examples
Show the information of a hlaAlleleClass
object.
1 2 |
object |
an object of |
show |
if TRUE, show information |
... |
further arguments passed to or from other methods |
Return a data.frame
of count and frequency for each HLA allele.
Xiuwen Zheng
1 2 3 4 5 6 7 8 9 10 | # load HLA types and SNP genotypes
data(HLA_Type_Table, package="HIBAG")
# make a "hlaAlleleClass" object
hla.id <- "A"
hla <- hlaAllele(HLA_Type_Table$sample.id,
H1 = HLA_Type_Table[, paste(hla.id, ".1", sep="")],
H2 = HLA_Type_Table[, paste(hla.id, ".2", sep="")],
locus=hla.id, assembly="hg19")
summary(hla)
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