CalculPWM: CalculPWM: To calculate Position Weight Matrix
In MEET: MEET: Motif Elements Estimation Toolkit
Description
Usage
Arguments
Value
Author(s)
Examples
Description
This function calculates the PWM (Position Weigth Matrix) from set of aligned nucleotide sequences.
Usage
1
CalculPWM(matriu)
Arguments
matriu
A set of aligned nucleotide sequences
Value
A matrix of characters
Author(s)
Erola Pairo <epairo@ibecbarcelona.eu> and Joan Maynou <joan.maynou@upc.edu>
Examples
1
2
3
data(TranscriptionFactor)
matriu<-TranscriptionFactor
resul<-CalculPWM(matriu)
MEET documentation built on May 2, 2019, 5:52 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
This function calculates the PWM (Position Weigth Matrix) from set of aligned nucleotide sequences.
Usage
1 | CalculPWM(matriu)
|
Arguments
matriu |
A set of aligned nucleotide sequences |
Value
A matrix of characters
Author(s)
Erola Pairo <epairo@ibecbarcelona.eu> and Joan Maynou <joan.maynou@upc.edu>
Examples
1 2 3 | data(TranscriptionFactor)
matriu<-TranscriptionFactor
resul<-CalculPWM(matriu)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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