joint.probability: Joint Porbability

In MEET: MEET: Motif Elements Estimation Toolkit

Description

This function calculates the joint probability of each base-couple among two positions of the training.set

Usage

joint.probability(training.set, Prob, prob_parella)

Arguments

training.set	A set of aligned nucleotide sequence
Prob	Background probability of each base within genome
prob_parella	Background probability of correlation among bases within genome

Author(s)

Joan Maynou <[e-mail]>

See Also

probability, probIdem, probtransicio

Examples

data(TranscriptionFactor)
data(BackgroundOrganism)
training.set<-TranscriptionFactor
prob_parella<-probability.couple(Prob)
pmXY<-joint.probability(training.set, Prob, prob_parella)

MEET documentation built on May 2, 2019, 5:52 p.m.