API for MEET
MEET: Motif Elements Estimation Toolkit

Global functions
Alignment Man page Source code
Backgroundorganism Man page
CalculInformation Man page Source code
CalculPSSM Man page Source code
CalculPWM Man page Source code
CalculRedundancy Man page Source code
CalculScores Man page Source code
CalculSimilarity Man page Source code
ConstructModel Man page Source code
CreateConsensus Man page Source code
DivergenceDROSOPHILA Man page Source code
DivergenceHOMO Man page Source code
DivergenceMUS Man page Source code
DivergenceRATTUS Man page Source code
DrosophilaDivergence Man page
DrosophilaEntropy Man page
DrosophilaQresiduals Man page
EntropyDROSOPHILA Man page Source code
EntropyHOMO Man page Source code
EntropyMUS Man page Source code
EntropyRATTUS Man page Source code
Hmemory Man page Source code
HomoDivergence Man page
HomoEntropy Man page
HomoQresiduals Man page
Hread Man page Source code
JacksonParameters Man page Source code
MEET Man page Source code
MEET-package Man page
MImemory Man page Source code
MIread Man page Source code
Model Man page
ModelDivergence Man page Source code
ModelEntropy Man page Source code
ModelMATCH Man page Source code
ModelMDscan Man page Source code
ModelMEME Man page Source code
ModelPCA Man page Source code
Models Man page Source code
ModeltransMEME Man page Source code
MusDivergence Man page
MusEntropy Man page
MusQresiduals Man page
NumericalTF Man page
PCanalysis Man page Source code
PredictDivergence Man page Source code
PredictEntropy Man page Source code
PredictMATCH Man page Source code
PredictMDscan Man page Source code
PredictMEME Man page Source code
PredictPCA Man page Source code
Prediction Man page Source code
PredicttransMEME Man page Source code
QresidualsDROSOPHILA Man page Source code
QresidualsHOMO Man page Source code
QresidualsMUS Man page Source code
QresidualsRATTUS Man page Source code
QtoJackson Man page Source code
ROCmodel Man page Source code
RattusDivergence Man page
RattusEntropy Man page
RattusQresiduals Man page
Read.aligned Man page Source code
RenyiOrder Man page
Sequence Man page
TFlogodds Man page
TranscriptionFactor Man page
align.MEME Man page Source code
align.clustalw Man page Source code
align.muscle Man page Source code
chooseModel Man page Source code
classMODEL Man page Source code
correction.entropy Man page Source code
correction.redundancy Man page Source code
correctionaprox Man page Source code
detection Man page Source code
detector_1rOrdre_diff Man page Source code
detector_2nOrdre Man page Source code
detector_2nOrdre_init Man page Source code
diffInstructions Man page Source code
divergence.Renyi Man page Source code
divergence.Shannon Man page Source code
entropy.Renyi Man page Source code
entropy.Shannon Man page Source code
entropy.corrected Man page Source code
entropy.joint Man page Source code
iicc Man page
joint.probability Man page Source code
kfold.Divergence Man page Source code
kfold.Entropy Man page Source code
kfold.MATCH Man page Source code
kfold.MDscan Man page Source code
kfold.MEME Man page Source code
kfold.PCA Man page Source code
kfold.transMEME Man page Source code
missing.fun Man page Source code
motif.mast Man page Source code
numericalDNA Man page Source code
organism Man page
probability Man page Source code
probability.couple Man page Source code
pvalue Man page Source code
read.mast Man page Source code
readMEME Man page Source code
redundancy Man page Source code
run.read.MDscan Man page Source code
scoreMDscan Man page Source code
standardout Man page Source code
writeMEME Man page Source code
writeResultsHTML Man page Source code
MEET documentation built on May 31, 2017, 4:10 a.m.