scoreMDscan: Output MDscan method

In MEET: MEET: Motif Elements Estimation Toolkit

Description

This function writes the output MDscan method. The output contains the next fields:sequence, direction, score MDscan.

Usage

scoreMDscan(input, k, matriu, direction)

Arguments

input	Score MDscan
k	Length DNA sequence
matriu	A set of aligned nucleotide sequence
direction	Direction of DNA sequence

Details

Output's run.read.MDscan is input's scoreMDscan

Author(s)

Erola Pairo <[e-mail]> and Joan Maynou <[e-mail]>

See Also

run.read.MDscan

Examples

data(iicc)
#data(TranscriptionFactor)
#matriu<-TranscriptionFactor
#scoreMDscan(input=resultsMDscan,k=length(iicc$DNA),matriu,direction="b")

MEET documentation built on May 2, 2019, 5:52 p.m.