Description Usage Arguments Author(s) See Also Examples
This function reads divergence values saved in memory. From the divergence values, MIread calculates the variation of the total divergence when the candidate sequence is added to the set.
1 |
training.set |
A set of nucleotide sequences |
val.set |
A candidate sequence |
iicc |
A set of inicial conditions for the MEET-package |
Joan Maynou <joan.maynou@upc.edu>
MImemory
1 2 3 4 5 6 7 8 9 10 | data(iicc)
data(BackgroundOrganism)
training.set<-iicc$Transcriptionfactor
val.set<-sample(c('A','T','C','G'),ncol(training.set), replace=TRUE,Prob)
res<-detector_2nOrdre_init(training.set, val.set, iicc)
iicc<-c(iicc,res)
iicc$parametersIdeal<-1
memory<-MImemory(iicc,training.set)
iicc<-c(iicc,memory)
MIread(training.set,val.set,iicc)
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