MIread: To read PredictDivergence values

Description Usage Arguments Author(s) See Also Examples

View source: R/MIread.R

Description

This function reads divergence values saved in memory. From the divergence values, MIread calculates the variation of the total divergence when the candidate sequence is added to the set.

Usage

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MIread(training.set,val.set,iicc)

Arguments

training.set

A set of nucleotide sequences

val.set

A candidate sequence

iicc

A set of inicial conditions for the MEET-package

Author(s)

Joan Maynou <joan.maynou@upc.edu>

See Also

MImemory

Examples

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data(iicc)
data(BackgroundOrganism)
training.set<-iicc$Transcriptionfactor
val.set<-sample(c('A','T','C','G'),ncol(training.set), replace=TRUE,Prob)
res<-detector_2nOrdre_init(training.set, val.set, iicc)
iicc<-c(iicc,res)
iicc$parametersIdeal<-1
memory<-MImemory(iicc,training.set)
iicc<-c(iicc,memory)
MIread(training.set,val.set,iicc)

MEET documentation built on May 2, 2019, 5:52 p.m.