standardout: Standard output detector

In MEET: MEET: Motif Elements Estimation Toolkit

Description

This function writes output detector (ITEME, MEME, transMEME and MDscan) in standard format.

Usage

standardout(Rdetector, iicc)

Arguments

Rdetector	Output detector for ITEME, MEME, transMEME and MDscan
iicc	Set of initial conditions for the MEET-package: mode, method, background,alignment,threshold,parameters,Transcriptionfactor,nummotif,lenmotif,sentit,position,missing,vector,gapopen,maxiters,gapextend

Details

Rdetector is a list of numerical vectors.

Author(s)

Joan Maynou <[e-mail]>

Examples

data(iicc)
pathMEET<-system.file("exdata",package="MEET")
Rdetector<-kfold.PCA(iicc,TF=paste(pathMEET,"AP1.fa",sep="/"))
standardout(Rdetector,iicc)

MEET documentation built on May 2, 2019, 5:52 p.m.