get_markers: get_markers
In FlowSOM: Using self-organizing maps for visualization and interpretation of cytometry data
Description
Usage
Arguments
Value
See Also
Examples
Description
Get marker names, given a flowframe. As available in "desc". If this is NA,
defaults to channel name.
Usage
1
get_markers(ff, markers)
Arguments
ff
The flowFrame of interest
markers
Vector with markers or channels of interest
Value
Corresponding marker names
See Also
Examples
1
2
3
4
5
# Read the flowFrame
fileName <- system.file("extdata", "68983.fcs", package="FlowSOM")
ff <- flowCore::read.FCS(fileName)
get_channels(ff, c("FSC-A", "CD3", "FITC-A"))
get_markers(ff, c("FSC-A", "CD3", "FITC-A"))
FlowSOM documentation built on Nov. 8, 2020, 6:40 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value See Also Examples
Description
Get marker names, given a flowframe. As available in "desc". If this is NA, defaults to channel name.
Usage
1 | get_markers(ff, markers)
|
Arguments
ff |
The flowFrame of interest |
markers |
Vector with markers or channels of interest |
Value
Corresponding marker names
See Also
Examples
1 2 3 4 5 | # Read the flowFrame
fileName <- system.file("extdata", "68983.fcs", package="FlowSOM")
ff <- flowCore::read.FCS(fileName)
get_channels(ff, c("FSC-A", "CD3", "FITC-A"))
get_markers(ff, c("FSC-A", "CD3", "FITC-A"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.