get_markers: get_markers

Description Usage Arguments Value See Also Examples

View source: R/0_FlowSOM.R

Description

Get marker names, given a flowframe. As available in "desc". If this is NA, defaults to channel name.

Usage

1
get_markers(ff, markers)

Arguments

ff

The flowFrame of interest

markers

Vector with markers or channels of interest

Value

Corresponding marker names

See Also

get_channels

Examples

1
2
3
4
5
   # Read the flowFrame
   fileName <- system.file("extdata", "68983.fcs", package="FlowSOM")
   ff <- flowCore::read.FCS(fileName)
   get_channels(ff, c("FSC-A", "CD3", "FITC-A"))
   get_markers(ff, c("FSC-A", "CD3", "FITC-A"))

FlowSOM documentation built on Nov. 8, 2020, 6:40 p.m.