Calculate differences in cell counts between groups

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Description

Calculate differences in cell counts between groups

Usage

1
CountGroups(fsom, groups, plot = TRUE, silent = FALSE)

Arguments

fsom

FlowSOM object as generated by BuildSOM

groups

List containing an array with file names for each group

plot

Logical. If TRUE, make a starplot of each individual file

silent

Logical. If TRUE, print progress messages

Value

Distance matrix

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