Files in FourCSeq
Package analyse 4C sequencing data

DESCRIPTION
NAMESPACE
inst/CITATION
inst/doc/FourCSeq.pdf
inst/doc/FourCSeq.Rnw
inst/doc/FourCSeq.R
inst/extdata/primer.fa
inst/extdata/dm3_chr2L_1-6900.fa
inst/extdata/bam/CRM_ap_ApME680_MESO_6-8h_2_testdata.bam.bai
inst/extdata/bam/CRM_ap_ApME680_WE_6-8h_1_testdata.bam.bai
inst/extdata/bam/CRM_ap_ApME680_WE_3-4h_1_testdata.bam
inst/extdata/bam/CRM_ap_ApME680_WE_6-8h_2_testdata.bam
inst/extdata/bam/CRM_ap_ApME680_MESO_6-8h_1_testdata.bam.bai
inst/extdata/bam/CRM_ap_ApME680_WE_6-8h_2_testdata.bam.bai
inst/extdata/bam/CRM_ap_ApME680_WE_3-4h_2_testdata.bam.bai
inst/extdata/bam/CRM_ap_ApME680_WE_6-8h_1_testdata.bam
inst/extdata/bam/CRM_ap_ApME680_WE_3-4h_1_testdata.bam.bai
inst/extdata/bam/CRM_ap_ApME680_MESO_6-8h_2_testdata.bam
inst/extdata/bam/CRM_ap_ApME680_MESO_6-8h_1_testdata.bam
inst/extdata/bam/CRM_ap_ApME680_WE_3-4h_2_testdata.bam
inst/extdata/python/demultiplex.py
vignettes/readmapping.pdf
vignettes/FourCSeq.Rnw
vignettes/literature.bib
R/plotResults.R R/functions.R R/reference_fragments.R R/classes.R man/countFragmentOverlapsSecondCutter.Rd man/smoothCounts.Rd man/countFragmentOverlaps.Rd man/plotNormalizationFactors.Rd man/writeTrackFiles.Rd man/normalizeRPM.Rd man/getReferenceSeq.Rd man/getDistAroundVp.Rd man/addPeaks.Rd man/plotZScores.Rd man/getAllResults.Rd man/plotScatter.Rd man/getZScores.Rd man/fc.Rd man/addFragments.Rd man/combineFragEnds.Rd man/getNormalizationFactors.Rd man/distFitMonotone.Rd man/getDifferences.Rd man/addViewpointFrags.Rd man/fcf.Rd man/plotFits.Rd man/FourC.Rd man/findViewpointFragments.Rd man/smoothHitPerCent.Rd man/plotDifferences.Rd man/distFitMonotoneSymmetric.Rd
build/vignette.rds
data/fcf.rda
data/datalist
data/fc.rda
FourCSeq documentation built on Nov. 1, 2018, 3:38 a.m.