Description Usage Arguments Details Value Examples
getDistAroundVp
Add the distance information for a given viewpoint
to the fragment data.
1 | getDistAroundVp(vp, vpData, fragData)
|
vp |
A single character string with the selected viewpoint. |
vpData |
|
fragData |
|
Mid positions of the fragments are defined as start + (end - start)
Updated GRanges
object that contains the distance from the viewpoint
for the fragments on the viewpoint chromosome.
1 2 3 | data(fc, package="FourCSeq")
fragmentDataWithDistance <- getDistAroundVp("ap", colData(fc), rowRanges(fc))
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