maxAligned: Returned the aligned motif parts
In PWMEnrich: PWM enrichment analysis
Description
Usage
Arguments
Value
Description
This function takes the offset of first motif relative to second and
chops off the end of both motifs that are not aligned. It returns a list
containing only the columns that align.
Usage
1
maxAligned(m1, m2, offset)
Arguments
m1
frequency matrix of first motif
m2
frequency matrix of second motif
offset
a number of nucleotides by which the first motif is offsetted compared to the second
Value
a list of column-trimmed motifs m1, m2
PWMEnrich documentation built on Nov. 8, 2020, 7:45 p.m.
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Description Usage Arguments Value
Description
This function takes the offset of first motif relative to second and chops off the end of both motifs that are not aligned. It returns a list containing only the columns that align.
Usage
1 | maxAligned(m1, m2, offset)
|
Arguments
m1 |
frequency matrix of first motif |
m2 |
frequency matrix of second motif |
offset |
a number of nucleotides by which the first motif is offsetted compared to the second |
Value
a list of column-trimmed motifs m1, m2
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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