baseQualityHist: Plot A Histogram Of The Base Qualities.

Description Usage Arguments Author(s)

View source: R/qualityControl.R

Description

Create a histogram based on the quality of every single base from all sequences.

Usage

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  baseQualityHist(object, xlab="Quality score", ylab="Number of bases", col="firebrick1", breaks=40,
     ...)

Arguments

object

An object of class QualityScaledDNAStringSet, ShortReadQ or SFFContainer.

xlab

The X axis label.

ylab

The Y axis label.

col

The plotting color.

breaks

The number of breaks in the histogram (see ‘hist’).

...

Arguments to be passed to methods, such as graphical parameters (see ‘par’).

Author(s)

Christian Ruckert


R453Plus1Toolbox documentation built on Nov. 1, 2018, 2:27 a.m.