fDataAmp: Access the amplicon data of an AVASet.

Description Usage Arguments Value Author(s) See Also Examples

Description

Similar to fData of the Biobase ExpressionSet, this function returns the feature data of the amplicon slot of an instance of the AVASet.

Usage

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    fDataAmp(object) 

Arguments

object

An link{AVASet-class} object.

Value

The feature data of the amplicon slot contains the names, primers, start/end positions and reference sequences of all amplicons (seeAVASet-class for details). It returns a data frame.

Author(s)

Christoph Bartenhagen

See Also

featureDataAmp, assayDataAmp,AVASet-class

Examples

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    # load an AVA dataset containing 6 samples, 4 amplicons and 259 variants
    data(avaSetExample)
    avaSetExample

    # show contents amplicon feature data
    fDataAmp(avaSetExample)

R453Plus1Toolbox documentation built on May 20, 2017, 9:53 p.m.

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