featureDataAmp: Access the amplicon data of an AVASet

Description Usage Arguments Value Author(s) See Also Examples

Description

Similar to featureData of the Biobase ExpressionSet, this function returns the feature data and feature meta of the amplicon slot of an instance of the AVASet.

Usage

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    featureDataAmp(object) 

Arguments

object

An link{AVASet-class} object.

Value

The feature data of the amplicon slot contains the names, primers, start/end positions and reference sequences of all amplicons (see AVASet-class for details). The returned object is of class AnnotatedDataFrame.

Author(s)

Christoph Bartenhagen

See Also

fDataAmp, assayDataAmp, AVASet-class,

Examples

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    # load an AVA dataset containing 6 samples, 4 amplicons and 259 variants
    data(avaSetExample)
    avaSetExample

    # show contents amplicon feature data
    featureDataAmp(avaSetExample)

R453Plus1Toolbox documentation built on May 31, 2017, 11:49 a.m.

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