detectFileFormat: Detect file format
In Rqc: Quality Control Tool for High-Throughput Sequencing Data
Description
Usage
Arguments
Value
Examples
View source: R/detectFileFormat.R
Description
Detect file format
Usage
1
Arguments
file
file name
Value
FastqFile or BamFiles objects
Examples
1
2
3
4
folder <- system.file(package="ShortRead", "extdata/E-MTAB-1147")
files <- list.files(full.names=TRUE, path=folder)
input <- lapply(files, detectFileFormat)
sapply(input, class)
Rqc documentation built on Nov. 8, 2020, 5:11 p.m.
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Description Usage Arguments Value Examples
View source: R/detectFileFormat.R
Description
Detect file format
Usage
1 |
Arguments
file |
file name |
Value
FastqFile or BamFiles objects
Examples
1 2 3 4 | folder <- system.file(package="ShortRead", "extdata/E-MTAB-1147")
files <- list.files(full.names=TRUE, path=folder)
input <- lapply(files, detectFileFormat)
sapply(input, class)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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