rqcShinyReport: Interactive Quality Control Report
In Rqc: Quality Control Tool for High-Throughput Sequencing Data

Description Usage Arguments Value Author(s) Examples

This function runs a Shiny web application of interactive Rqc report. This is useful for large amount of files and sample groups.

1	rqcShinyReport(rqcResultSet)

rqcResultSet

list of RqcResultSet-class objects

function

Welliton Souza

checkpoint("Rqc", path=system.file(package="Rqc", "extdata"), {
  folder <- system.file(package="ShortRead", "extdata/E-MTAB-1147")
  files <- list.files(full.names=TRUE, path=folder)
  rqcResultSet <- rqcQA(files, pair=c(1,1), workers=1)
}, keep="rqcResultSet")
# rqcShinyReport(rqcResultSet)