Description Usage Arguments Value Functions Author(s) Examples
View source: R/rqcCycleGCPlot.R
Creates a line graph of per cycle percentual GC.
1 2 3 | rqcCycleGCCalc(rqcResultSet)
rqcCycleGCPlot(rqcResultSet)
|
rqcResultSet |
list of |
Plot object from ggplot
function.
rqcCycleGCCalc
: calculates necessary statistics
Welliton Souza
1 2 3 4 5 6 | checkpoint("Rqc", path=system.file(package="Rqc", "extdata"), {
folder <- system.file(package="ShortRead", "extdata/E-MTAB-1147")
files <- list.files(full.names=TRUE, path=folder)
rqcResultSet <- rqcQA(files, pair=c(1,1), workers=1)
}, keep="rqcResultSet")
rqcCycleGCPlot(rqcResultSet)
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