Rqc-package: Quality Control Tool for High-Throughput Sequencing Data

In Rqc: Quality Control Tool for High-Throughput Sequencing Data

Description

Rqc is an optimized tool designed for quality assessment of high-throughput sequencing data. It performs parallel processing of entire files and produces a report, which contains a set of high-resolution images that can be directly used on publications.

Author(s)

Welliton Souza, Benilton Carvalho

Maintainer: Welliton Souza <[e-mail]>

Examples

  options(device.ask.default = FALSE)
  folder <- system.file(package="ShortRead", "extdata/E-MTAB-1147")
  rqc(folder, ".fastq.gz", pair=c(1,1), workers=1)
  

Rqc documentation built on Nov. 8, 2020, 5:11 p.m.