snpArrayAssays: Create an assays object from log R ratios and B allele...

Description Usage Arguments Examples

View source: R/methods-SnpArrayExperiment.R

Description

This function is exported primarily for internal use by other BioC packages.

Usage

1
snpArrayAssays(cn = new("matrix"), baf = new("matrix"), ...)

Arguments

cn

matrix of log R ratios

baf

matrix of B allele frequencies

...

additional matrices of the same dimension, such as SNP genotypes.

Examples

1
2
3
4
data(snp_exp)
r <- lrr(snp_exp)
b <- baf(snp_exp)
sl <- snpArrayAssays(cn=r, baf=b)

VanillaICE documentation built on Nov. 17, 2017, 10:24 a.m.