HMMList-class: Class, constructor, and methods for representing HMM results...

Description Usage Arguments Slots See Also Examples

Description

Each element of the HMMList contains the genomic intervals of the HMM segmentation (GRanges-derived object), parameters from the Baum-Welch, and a FilterParam object.

Usage

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## S4 method for signature 'HMMList'
show(object)

## S4 method for signature 'HMMList'
unlist(x, recursive = TRUE, use.names = TRUE)

Arguments

object

a HMMList object

x

a HMMList object

recursive

logical; currently ignored

use.names

logical; currently ignored

Slots

.Data

a list. Each element of the list should be a HMM object.

See Also

HMM

Examples

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VanillaICE documentation built on Nov. 8, 2020, 7:33 p.m.