HmmTrellisParam: Constructor for HmmTrellisParam class

Description Usage Arguments

Description

Constructor for HmmTrellisParam class

Usage

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HmmTrellisParam(ylimits = list(c(0, 1), c(-3, 1)), expandfun = function(g) {
      width(g) * 50 })

Arguments

ylimits

length-two list of the y-axis limits for B allele frequencies and log R ratios, respectively

expandfun

a function that takes a length-one GRanges object as an argument and computes a width relative to the width of the GRanges object



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