state-methods: Accessor for the Viterbi state path
In VanillaICE: A Hidden Markov Model for high throughput genotyping arrays
Description
The states are represented as integers: 1=homozygous deletion,
2=hemizygous deletion, 3=diploid normal heterozygosity, 4=diploid
region of homozygosity, 5=single copy gain, 6=two or more copy gain.
Usage
1
2
## S4 method for signature 'Viterbi'
state(object)
Arguments
object
a Viterbi object
VanillaICE documentation built on Nov. 8, 2020, 7:33 p.m.
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Description
The states are represented as integers: 1=homozygous deletion, 2=hemizygous deletion, 3=diploid normal heterozygosity, 4=diploid region of homozygosity, 5=single copy gain, 6=two or more copy gain.
Usage
1 2 | ## S4 method for signature 'Viterbi'
state(object)
|
Arguments
object |
a |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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