writeTpmap: Writes BPMAP and TPMAP files.
In affxparser: Affymetrix File Parsing SDK

Description Usage Arguments Details Value Author(s) See Also

Writes BPMAP and TPMAP files.

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writeTpmap(filename, bpmaplist, verbose = 0)

tpmap2bpmap(tpmapname, bpmapname, verbose = 0)

`filename`	The filename.
`bpmaplist`	A list structure similar to the result of `readBpmap`.
`tpmapname`	Filename of the TPMAP file.
`bpmapname`	Filename of the BPMAP file.
`verbose`	How verbose do we want to be.

writeTpmap writes a text probe map file, while tpmap2bpmap converts such a file to a binary probe mapping file. Somehow Affymetrix has different names for the same structure, depending on whether the file is binary or text. I have seen many TPMAP files referred to as BPMAP files.

These functions are called for their side effects (creating files).

Kasper Daniel Hansen

readBpmap

affxparser documentation built on Nov. 8, 2020, 7:26 p.m.