data-KcViabSmall: A sample cellHTS object - D. melanogaster genome-wide RNAi...

In cellHTS2: Analysis of cell-based screens - revised version of cellHTS

Description

Archived cellHTS object corresponding to the first three 384-well plates of a genome-wide RNAi screen of cell viability in Drosophila Kc167 cells

Usage

##cellHTS object, see examples for details

Format

cellHTS object

References

Boutros, M., Kiger, A.A., Armknecht,S., Kerr,K., Hild,M., Koch,B., Haas, S.A., Heidelberg Fly Array Consortium, Paro,R. and Perrimon, N. (2004) Genome-wide RNAi analysis of growth and viability in Drosophila cells, Science 303:832–5.

Examples

    data(KcViabSmall)

Example output

Loading required package: RColorBrewer
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colMeans, colSums, colnames, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, lengths, mapply, match, mget, order, paste, pmax, pmax.int,
    pmin, pmin.int, rank, rbind, rowMeans, rowSums, rownames, sapply,
    setdiff, sort, table, tapply, union, unique, unsplit, which,
    which.max, which.min

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: genefilter
Loading required package: splots
Loading required package: vsn
Loading required package: hwriter
Loading required package: locfit
locfit 1.5-9.1 	 2013-03-22
Loading required package: grid
Warning message:
In read.dcf(con) :
  URL 'http://bioconductor.org/BiocInstaller.dcf': status was 'Couldn't resolve host name'
Warning message:
system call failed: Cannot allocate memory 

cellHTS2 documentation built on Nov. 8, 2020, 6 p.m.