Description Usage Arguments Value
This function takes a list of Fusion objects and creates a data frame in the format that RCircos::RCircos.Link.Plot() expects for link data.
1 | .fusions_to_link_data(fusion_list, min_link_width = 1, max_link_widt = 10)
|
fusion_list |
A list of Fusion objects. |
min_link_width |
The minimum link line width. Default = 1 |
max_link_widt |
The maximum link line width. Default = 10 |
A data frame with fusion link data compatible with RCircos::RCircos.Link.Plot()
# @examples # Apparently examples shouldn't be set on private functions defuse833ke <- system.file("extdata", "defuse_833ke_results.filtered.tsv", package="chimeraviz") fusions <- import_defuse(defuse833ke, "hg19", 3) linkData <- chimeraviz::.fusions_to_link_data(fusions) # This linkData can be used with RCircos::RCircos.Link.Plot()
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