generatePermutation: Generate permutation for permutation testing
In deltaCaptureC: This Package Discovers Meso-scale Chromatin Remodeling from 3C Data
Description
Usage
Arguments
Value
Examples
View source: R/deltaCaptureC.R
Description
This function takes a set of row ranges and an inner region and
generates a permutation which is symmetric on the inner region and
arbitrary on the remainder
Usage
1
generatePermutation(gr, innerRegion)
Arguments
gr
a GRanges object which should be ordered
innerRegion
a GRanges object which should be a single interval
Value
a permutation of 1:length(gr)
Examples
1
permutations = generatePermutation(smallBins,viewpointRegion)
deltaCaptureC documentation built on Nov. 8, 2020, 5:31 p.m.
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Description Usage Arguments Value Examples
View source: R/deltaCaptureC.R
Description
This function takes a set of row ranges and an inner region and generates a permutation which is symmetric on the inner region and arbitrary on the remainder
Usage
1 | generatePermutation(gr, innerRegion)
|
Arguments
gr |
a GRanges object which should be ordered |
innerRegion |
a GRanges object which should be a single interval |
Value
a permutation of 1:length(gr)
Examples
1 | permutations = generatePermutation(smallBins,viewpointRegion)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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