plotSignificantRegions: This produces a plot of the region of interest showing...

In deltaCaptureC: This Package Discovers Meso-scale Chromatin Remodeling from 3C Data

Description

This function takes a input the GRanges object produced by getSignificant regions and produces a ggplot of significant features

Usage

plotSignificantRegions(significantRegions, significanceType = "abs",
  title = "Significant Regions", xLabel = "viewpoint", legend = TRUE)

Arguments

significantRegions	a GRanges object as produced by getSignificantRegions
significanceType	= 'abs' a variable indicating whether to plot significance according to min, max or abs.
title	a title for the plot
xLabel	= 'viewpoint' supplies an xlabel
legend	= TRUE whether or not to show the legend

Value

a ggplot object

Examples

plotOfSignificantRegions = plotSignificantRegions(significantRegions)

deltaCaptureC documentation built on Nov. 8, 2020, 5:31 p.m.