getRunAndLopsidednessStatistics: Get the distribution of run and lopsidedness statistics
In deltaCaptureC: This Package Discovers Meso-scale Chromatin Remodeling from 3C Data
Description
Usage
Arguments
Value
View source: R/deltaCaptureC.R
Description
Get the distribution of run and lopsidedness statistics
Usage
1
2
getRunAndLopsidednessStatistics(scrambledDeltas, viewpointRegion,
colName = "delta")
Arguments
scrambledDeltas
a list of rebinned (i.e., to large bin size)
of scrambled deltas
viewpointRegion
a GRanges object giving the region that is
reserved for lopsidedness
colName
= 'delta'
Value
a Nx4 matrix giving the min, max, max(abs(min),abs(max))
and lopsidedness for the run totals in the list of scrambled
deltas.
deltaCaptureC documentation built on Nov. 8, 2020, 5:31 p.m.
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Description Usage Arguments Value
View source: R/deltaCaptureC.R
Description
Get the distribution of run and lopsidedness statistics
Usage
1 2 | getRunAndLopsidednessStatistics(scrambledDeltas, viewpointRegion,
colName = "delta")
|
Arguments
scrambledDeltas |
a list of rebinned (i.e., to large bin size) of scrambled deltas |
viewpointRegion |
a GRanges object giving the region that is reserved for lopsidedness |
colName |
= 'delta' |
Value
a Nx4 matrix giving the min, max, max(abs(min),abs(max)) and lopsidedness for the run totals in the list of scrambled deltas.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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