getNormalizedCountsSE: Get normalized counts
In deltaCaptureC: This Package Discovers Meso-scale Chromatin Remodeling from 3C Data
Description
Usage
Arguments
Value
Examples
View source: R/deltaCaptureC.R
Description
This function takes a SummarizedExperiment giving the the counts
for each replicate of the two treatments and computes and affixes
an assay giving the normalized version of these counts.
Usage
1
Arguments
se
A SummarizedExperiment with an assay called counts giving
the raw counts for each replicate of the two treatments.
Value
A SummarizedExperiment including a an assay of the
normalized counts called normalizedCounts.
Examples
1
miniSENormalized = getNormalizedCountsSE(miniSE)
deltaCaptureC documentation built on Nov. 8, 2020, 5:31 p.m.
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Description Usage Arguments Value Examples
View source: R/deltaCaptureC.R
Description
This function takes a SummarizedExperiment giving the the counts for each replicate of the two treatments and computes and affixes an assay giving the normalized version of these counts.
Usage
1 |
Arguments
se |
A SummarizedExperiment with an assay called counts giving the raw counts for each replicate of the two treatments. |
Value
A SummarizedExperiment including a an assay of the normalized counts called normalizedCounts.
Examples
1 | miniSENormalized = getNormalizedCountsSE(miniSE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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