getSizeFactorsDF: Get the size factors for count normalization
In deltaCaptureC: This Package Discovers Meso-scale Chromatin Remodeling from 3C Data
Description
Usage
Arguments
Value
Examples
View source: R/deltaCaptureC.R
Description
This function takes a data frame giving chr, start, end and count for experimental
replicates and returns the size factors for each of the replicates for use in
normalization
Usage
1
getSizeFactorsDF(countsDF)
Arguments
countsDF
A data frame whose first three columns are chr, start and end, and
whose remaining columns are count data for experimental replicates
Value
The size factors for the columns of countsDF
Examples
1
sf = getSizeFactorsDF(miniSEDF)
deltaCaptureC documentation built on Nov. 8, 2020, 5:31 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
View source: R/deltaCaptureC.R
Description
This function takes a data frame giving chr, start, end and count for experimental replicates and returns the size factors for each of the replicates for use in normalization
Usage
1 | getSizeFactorsDF(countsDF)
|
Arguments
countsDF |
A data frame whose first three columns are chr, start and end, and whose remaining columns are count data for experimental replicates |
Value
The size factors for the columns of countsDF
Examples
1 | sf = getSizeFactorsDF(miniSEDF)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.