heatmapPhenoTest-methods: Methods for Function heatmapPhenoTest in Package 'phenoTest'

In phenoTest: Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation.

Description

Methods for function heatmapPhenoTest in Package ‘phenoTest’. For more information read the function's manual.

Methods

signature(x = "ExpressionSet", signatures = "character")

Method for an ExpressionSet object and one signature stored in an object of class character.

signature(x = "ExpressionSet", signatures = "list")

Method for an ExpressionSet object and several signatures stored in an object of class list.

signature(x = "ExpressionSet", signatures = "missing")

Method for an ExpressionSet object and no signatures.

signature(x = "ExpressionSet", signatures = "GeneSet")

Method for an ExpressionSet object and one signature stored in an object of class GeneSet.

signature(x = "ExpressionSet", signatures = "GeneSetCollection")

Method for an ExpressionSet object and several signatures stored in an object of class GeneSetCollection.

phenoTest documentation built on Nov. 8, 2020, 7:53 p.m.