DAISIE_sim_update_state_cr: Updates state of island given sampled event for a constant...

In DAISIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction

Updates state of island given sampled event for a constant rate case.

Description

Makes the event happen by updating island species matrix and species IDs. What event happens is determined by the sampling in the algorithm.

Usage

DAISIE_sim_update_state_cr(
  timeval,
  total_time,
  possible_event,
  maxspecID,
  mainland_spec,
  island_spec,
  stt_table
)

Arguments

timeval	Numeric defining current time of simulation.
total_time	Numeric defining the length of the simulation in time units.
possible_event	Numeric defining what event will happen.
maxspecID	Current species IDs.
mainland_spec	Number of mainland species.
island_spec	Matrix with current state of simulation containing number of species.
stt_table	Matrix with number of species at each time step.

Value

The updated state of the system, which is a list with the island_spec matrix, an integer maxspecID with the most recent ID of species and the stt_table, a matrix with the current species through time table.

See Also

DAISIE_sim_core_cr, DAISIE_sim_update_state_cr

DAISIE documentation built on Oct. 22, 2023, 1:06 a.m.