get_trans_rate: Calculate transition rate
In DAISIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction
get_trans_rate R Documentation
Calculate transition rate
Description
Internal function.
Calculates the transition rate given the current number of
immigrant species and the per capita rate.
Usage
get_trans_rate(trait_pars, island_spec)
Arguments
trait_pars
A named list containing diversification rates considering
two trait states created by create_trait_pars:
[1]:A numeric with the per capita transition rate with state1
[2]:A numeric with the per capita immigration rate with state2
[3]:A numeric with the per capita extinction rate with state2
[4]:A numeric with the per capita anagenesis rate with state2
[5]:A numeric with the per capita cladogenesis rate with state2
[6]:A numeric with the per capita transition rate with state2
[7]:A numeric with the number of species with trait state 2 on mainland
island_spec
Matrix with current state of simulation containing number
of species.
DAISIE documentation built on June 8, 2025, 11:28 a.m.
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| get_trans_rate | R Documentation |
Calculate transition rate
Description
Internal function. Calculates the transition rate given the current number of immigrant species and the per capita rate.
Usage
get_trans_rate(trait_pars, island_spec)
Arguments
trait_pars |
A named list containing diversification rates considering
two trait states created by
|
island_spec |
Matrix with current state of simulation containing number of species. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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