GeneExpressionData: Example gene expression data from two cell lines
In ICAMS: In-Depth Characterization and Analysis of Mutational Signatures ('ICAMS')

GeneExpressionData

R Documentation

Example gene expression data from two cell lines

Description

This data is designed to be used as an example in function
PlotTransBiasGeneExp and PlotTransBiasGeneExpToPdf.

Usage

gene.expression.data.HepG2

gene.expression.data.MCF10A

Format

A data.table which contains the expression values of genes.

An object of class data.table (inherits from data.frame) with 57736 rows and 4 columns.

Examples

gene.expression.data.HepG2
# Ensembl.gene.ID  gene.symbol  counts            TPM
# ENSG00000000003       TSPAN6    6007   33.922648455
# ENSG00000000005         TNMD       0    0.000000000
# ENSG00000000419         DPM1    4441   61.669371091
# ENSG00000000457        SCYL3    1368    3.334619195
# ENSG00000000460     C1orf112     916    2.416263423
#             ...          ...     ...            ...

ICAMS documentation built on June 22, 2024, 6:47 p.m.