GenerateVCFsFromIndelSimpleFile1: Generate reconstructed VCFs from indel (small insertions and...

In ICAMS: In-Depth Characterization and Analysis of Mutational Signatures ('ICAMS')

Generate reconstructed VCFs from indel (small insertions and deletions) simple file

Description

Generate reconstructed VCFs from indel (small insertions and deletions) simple file

Usage

GenerateVCFsFromIndelSimpleFile1(file, output.dir, max.mc.cores = 1)

Arguments

file	The name/path of the simple indel file, or a complete URL.
output.dir	The directory where the reconstructed VCFs will be saved.
max.mc.cores	The maximum number of cores to use. On Microsoft Windows machines it is silently changed to 1.

ICAMS documentation built on June 15, 2025, 1:08 a.m.