Restaple1536: Convert 1536-channel mutation-type identifiers like this...
In ICAMS: In-Depth Characterization and Analysis of Mutational Signatures ('ICAMS')
View source: R/other_catalog_formats.R
Restaple1536 R Documentation
Convert 1536-channel mutation-type identifiers like this "ACCGTA" -> "AC[C>A]GT"
Description
This is an internal function needed for generating
"non-canonical" row number formats for catalogs.
Usage
Restaple1536(c1)
Arguments
c1
A vector of character strings with the first 5 characters
being the source trinucleotide and the last character being the
mutated (center) nucleotide. E.g. ACCGTA means a mutation from
ACCGT > ACAGT.
ICAMS documentation built on June 22, 2024, 6:47 p.m.
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View source: R/other_catalog_formats.R
| Restaple1536 | R Documentation |
Convert 1536-channel mutation-type identifiers like this "ACCGTA" -> "AC[C>A]GT"
Description
This is an internal function needed for generating "non-canonical" row number formats for catalogs.
Usage
Restaple1536(c1)
Arguments
c1 |
A vector of character strings with the first 5 characters
being the source trinucleotide and the last character being the
mutated (center) nucleotide. E.g. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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