View source: R/multiMSE_internal.R
HistMICE | R Documentation |
Function that reconstructs historical stock trends from fitted qs and all other parameters including MICE components
HistMICE(
x,
StockPars,
FleetPars,
np,
nf,
nareas,
maxage,
nyears,
N,
VF,
FretA,
maxF = 0.9,
MPA,
Rel,
SexPars,
qs,
qfrac,
plusgroup
)
x |
Integer, the simulation number |
StockPars |
A list of sampled stock parameters, one list element per stock |
FleetPars |
A hierarchical list of sampled fleet parameters, first list level is stock, second is fleet |
np |
The number of stocks |
nf |
The number of fleets |
nareas |
The number of areas |
maxage |
The maximum number of modeled ages |
nyears |
The number of historical 'spool-up' years (from unfished to now) |
N |
An array of stock numbers |
VF |
An array of vulnerability |
FretA |
An array of retention |
maxF |
A numeric value specifying the maximum fishing mortality for any single age class |
MPA |
An of spatial closures by year |
Rel |
A list of inter-stock relationships see slot Rel of MOM object class |
SexPars |
A list of sex-specific relationships (SSBfrom, stock_age) |
qs |
Vector of q values |
qfrac |
Array of qfrac |
plusgroup |
Plusgroup - np-length vector |
T.Carruthers
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