Pplot2 | R Documentation |
A projection by projection plot of F/FMSY, B/BMSY, B/B0, and yield
Pplot2(
MSEobj,
YVar = c("F_FMSY", "SSB_SSBMSY"),
MPs = NA,
sims = NULL,
traj = c("all", "quant", "both"),
quants = c(0.1, 0.9),
incquant = TRUE,
quantcol = "lightgray",
RefYield = c("lto", "curr"),
LastYr = TRUE,
ref.lines = c(0.5, 1, 1.5),
maxMP = 6,
alpha = 60,
cex.axis = 1,
cex.lab = 1,
YLab = NULL,
incMP = TRUE,
MPcex = 1,
MPcol = "black",
incLeg = TRUE,
cex.leg = 1.5,
legPos = "topleft",
yline = NULL,
xline = NULL,
parOR = FALSE,
xaxis = TRUE,
yaxis = TRUE,
oneIt = TRUE,
...
)
MSEobj |
An object of class MSE |
YVar |
What to plot on the y-axis? Options are: |
MPs |
Optional subset by MP |
sims |
Optional subset by simulation |
traj |
Plot all projections ( |
quants |
Numeric vector of length 2 specifying the quantiles (e.g., 10th and 90th. Median is always included) |
incquant |
Logical. Include the quantiles or only plot median? |
quantcol |
Colour of the quantile polygon |
RefYield |
Should yield be relative to long-term optimum ( |
LastYr |
Logical. Include the last historical year in the yield projections? |
ref.lines |
Numeric vector of y-values for horizontal reference lines. Set to NULL to remove lines. |
maxMP |
Maximum number of MPs to plot |
alpha |
Alpha for transparency of lines |
cex.axis |
Size of axis text |
cex.lab |
Size of axis label |
YLab |
Optional label for y-axis |
incMP |
Logical. Include name of MP? |
MPcex |
Size of MP label |
MPcol |
Optional character vector of colors for MP labels |
incLeg |
Logical. Include a legend? |
cex.leg |
Size of legend text |
legPos |
Legend position |
yline |
Optional horizontal lines |
xline |
Optional vertical lines |
parOR |
Logical to over-ride the par parameters |
xaxis |
Logical. Should x-axis labels be displayed? |
yaxis |
Logical. Should y-axis labels be displayed? |
oneIt |
Logical. Should one iteration be plotted on the quantile plot? |
... |
Additional arguments to be passed to plotting functions |
T. Carruthers & A.Hordyk
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.