API for SuperCell
Simplification of scRNA-Seq Data by Merging Together Similar Cells
| Global functions | |
|---|---|
| SCimplify | Man page Source code |
| SCimplify_for_velocity | Man page Source code |
| SCimplify_from_embedding | Man page Source code |
| anndata_2_supercell | Man page Source code |
| build_knn_graph | Man page Source code |
| build_knn_graph_nn2 | Man page Source code |
| cell_lines | Man page |
| knn_graph_from_dist | Man page Source code |
| metacell2_anndata_2_supercell | Man page Source code |
| sc_mixing_score | Man page Source code |
| supercell_2_Seurat | Man page Source code |
| supercell_2_sce | Man page Source code |
| supercell_DimPlot | Man page Source code |
| supercell_FindAllMarkers | Man page Source code |
| supercell_FindMarkers | Man page Source code |
| supercell_GE | Man page Source code |
| supercell_GE_idx | Man page Source code |
| supercell_GeneGenePlot | Man page Source code |
| supercell_GeneGenePlot_single | Man page Source code |
| supercell_UMAP | Man page Source code |
| supercell_VlnPlot | Man page Source code |
| supercell_VlnPlot_single | Man page Source code |
| supercell_assign | Man page Source code |
| supercell_cluster | Man page Source code |
| supercell_estimate_velocity | Man page Source code |
| supercell_merge | Man page Source code |
| supercell_mergeGE | Man page Source code |
| supercell_plot | Man page Source code |
| supercell_plot_GE | Man page Source code |
| supercell_plot_UMAP | Man page Source code |
| supercell_plot_tSNE | Man page Source code |
| supercell_prcomp | Man page Source code |
| supercell_purity | Man page Source code |
| supercell_rescale | Man page Source code |
| supercell_silhouette | Man page Source code |
| supercell_tSNE | Man page Source code |
