API for TreeBUGS
Hierarchical Multinomial Processing Tree Modeling
| Global functions | |
|---|---|
| -.waic | Man page |
| .aFunction | Source code |
| .bFunction | Source code |
| .bf10Exact | Source code |
| .bf10JeffreysIntegrate | Source code |
| .hFunction | Source code |
| .jeffreysApproxH | Source code |
| .posteriorRho | Source code |
| .priorRho | Source code |
| .scaledBeta | Source code |
| BayesFactorMPT | Man page Source code |
| BayesFactorSlope | Man page Source code |
| PPP | Man page Source code |
| T1stat | Source code |
| T1stat.mat | Source code |
| T2stat | Source code |
| TreeBUGS | Man page |
| TreeBUGS-package | Man page |
| WAIC | Man page Source code |
| addPPP | Source code |
| approximatePosterior | Source code |
| arnold2013 | Man page |
| betaMPT | Man page Source code |
| betaMPTcpp | Man page Source code |
| betampt | Source code |
| betweenSubjectMPT | Man page Source code |
| callingSampler | Source code |
| check.hyperprior | Source code |
| checkModelfilename | Source code |
| checkNaming | Source code |
| checkNamingMatrix | Source code |
| checkNumItems | Source code |
| checkParEstFile | Source code |
| checkThetaNames | Source code |
| corSamples | Source code |
| correlationPosterior | Man page Source code |
| covDataCenter | Source code |
| covDataRead | Source code |
| covHandling | Source code |
| covRecodeFactor | Source code |
| covStringCorrelation | Source code |
| covStringPredictor | Source code |
| dProductBeta | Source code |
| dmix | Source code |
| extendMPT | Man page Source code |
| fitModel | Source code |
| fitModelCpp | Source code |
| genBetaMPT | Man page Source code |
| genMPT | Man page Source code |
| genTraitMPT | Man page Source code |
| getGroupMeans | Man page Source code |
| getGroupT1 | Source code |
| getParam | Man page Source code |
| getParameter | Source code |
| getRhoMatrix | Source code |
| getSamples | Man page Source code |
| getTransformed | Source code |
| idx2name | Source code |
| isIdentifiable | Source code |
| llMPT | Source code |
| logMultinomCoefficient | Source code |
| loglikMPT | Source code |
| makeBetaHyperprior | Source code |
| makeModelFile | Source code |
| makeTraitHyperprior | Source code |
| marginalMPT | Man page Source code |
| matAsList | Source code |
| mergeBranches | Source code |
| name2idx | Source code |
| parseEQN | Source code |
| parseRestrictions | Source code |
| plot.betaMPT | Man page Source code |
| plot.simpleMPT | Man page Source code |
| plot.traitMPT | Man page Source code |
| plotDistribution | Man page Source code |
| plotFit | Man page Source code |
| plotFreq | Man page Source code |
| plotParam | Man page Source code |
| plotPrior | Man page Source code |
| plotPriorPost | Man page Source code |
| posteriorPredictive | Man page Source code |
| predTypeDefault | Source code |
| print.betaMPT | Source code |
| print.betweenMPT | Source code |
| print.postPredP | Source code |
| print.simpleMPT | Source code |
| print.summary.betaMPT | Source code |
| print.summary.simpleMPT | Source code |
| print.summary.traitMPT | Source code |
| print.traitMPT | Source code |
| print.waic | Man page Source code |
| print.waic_difference | Man page Source code |
| printIndividualPar | Source code |
| printSummary | Source code |
| priorPredictive | Man page Source code |
| probitInverse | Man page Source code |
| rProductBeta | Source code |
| rb.estimate | Source code |
| rcat | Source code |
| readData | Source code |
| readEQN | Man page Source code |
| readSubjectData | Source code |
| readTransformedParam | Source code |
| renameBUGSoutput | Source code |
| rename_mcmc | Source code |
| resampling | Source code |
| rmix | Source code |
| sample.importance | Source code |
| sample.prior | Source code |
| sampleHyperprior | Source code |
| simpleMPT | Man page Source code |
| simplempt | Source code |
| summarizeMCMC | Man page Source code |
| summarizeMPT | Man page Source code |
| summary.betaMPT | Source code |
| summary.simpleMPT | Source code |
| summary.traitMPT | Source code |
| summary.waic | Source code |
| testHetChi | Man page Source code |
| testHetPerm | Man page Source code |
| thetaHandling | Source code |
| traitMPT | Man page Source code |
| transformedParameters | Man page Source code |
| withinSubjectEQN | Man page Source code |
| writeSummary | Source code |
