API for TreeBUGS
Hierarchical Multinomial Processing Tree Modeling

Global functions
BayesFactorMPT Man page Source code
BayesFactorSlope Man page Source code
PPP Man page Source code
T1stat Source code
T1stat.mat Source code
T2stat Source code
TreeBUGS Man page
TreeBUGS-package Man page
aFunction Source code
addPPP Source code
approximatePosterior Source code
arnold2013 Man page
bFunction Source code
betaMPT Man page Source code
betaMPTcpp Man page Source code
betampt Source code
betweenSubjectMPT Man page Source code
bf10Exact Source code
bf10JeffreysIntegrate Source code
callingSampler Source code
check.hyperprior Source code
checkModelfilename Source code
checkNaming Source code
checkNamingMatrix Source code
checkNumItems Source code
checkParEstFile Source code
checkThetaNames Source code
corSamples Source code
correlationPosterior Man page Source code
covDataCenter Source code
covDataRead Source code
covHandling Source code
covRecodeFactor Source code
covStringCorrelation Source code
covStringPredictor Source code
dProductBeta Source code
dmix Source code
extendMPT Man page Source code
fitModel Source code
fitModelCpp Source code
genBetaMPT Man page Source code
genMPT Man page Source code
genTraitMPT Man page Source code
getGroupMeans Man page Source code
getGroupT1 Source code
getParam Man page Source code
getParameter Source code
getRhoMatrix Source code
getSamples Man page Source code
getTransformed Source code
hFunction Source code
idx2name Source code
isIdentifiable Source code
jeffreysApproxH Source code
llMPT Source code
logMultinomCoefficient Source code
loglikMPT Source code
makeBetaHyperprior Source code
makeModelFile Source code
makeTraitHyperprior Source code
marginalMPT Man page Source code
matAsList Source code
mergeBranches Source code
name2idx Source code
parseEQN Source code
parseRestrictions Source code
plot.betaMPT Man page Source code
plot.simpleMPT Man page Source code
plot.traitMPT Man page Source code
plotDistribution Man page Source code
plotFit Man page Source code
plotFreq Man page Source code
plotParam Man page Source code
plotPrior Man page Source code
plotPriorPost Man page Source code
posteriorPredictive Man page Source code
posteriorRho Source code
predTypeDefault Source code
print.betaMPT Source code
print.betweenMPT Source code
print.postPredP Source code
print.simpleMPT Source code
print.summary.betaMPT Source code
print.summary.simpleMPT Source code
print.summary.traitMPT Source code
print.traitMPT Source code
printIndividualPar Source code
printSummary Source code
priorPredictive Man page Source code
priorRho Source code
probitInverse Man page Source code
rProductBeta Source code
rb.estimate Source code
rcat Source code
readData Source code
readEQN Man page Source code
readSubjectData Source code
readTransformedParam Source code
renameBUGSoutput Source code
rename_mcmc Source code
resampling Source code
rmix Source code
sample.importance Source code
sample.prior Source code
sampleHyperprior Source code
scaledBeta Source code
simpleMPT Man page Source code
simplempt Source code
summarizeMCMC Man page Source code
summarizeMPT Man page Source code
summary.betaMPT Source code
summary.simpleMPT Source code
summary.traitMPT Source code
testHetChi Man page Source code
testHetPerm Man page Source code
thetaHandling Source code
traitMPT Man page Source code
transformedParameters Man page Source code
withinSubjectEQN Man page Source code
writeSummary Source code
TreeBUGS documentation built on May 15, 2018, 5:06 p.m.