app_run2: Run UCSC Xena Shiny App with specifc content

In UCSCXenaShiny: Interactive Analysis of UCSC Xena Data

Run UCSC Xena Shiny App with specifc content

Description

Run UCSC Xena Shiny App with specifc content

Usage

app_run2(
  runMode = "client",
  port = getOption("shiny.port"),
  content = c("a", "s", "q", "p", "d")
)

Arguments

runMode	default is 'client' for personal user, set it to 'server' for running on server.
port	The TCP port that the application should listen on. If the port is not specified, and the shiny.port option is set (with options(shiny.port = XX)), then that port will be used. Otherwise, use a random port between 3000:8000, excluding ports that are blocked by Google Chrome for being considered unsafe: 3659, 4045, 5060, 5061, 6000, 6566, 6665:6669 and 6697. Up to twenty random ports will be tried.
content	Modules to enable. a: all modules s: only loading basic modules; q: add tpc (TCGA, PCAWG, CCLE) modules p: add tpc pipelines d: add pharmcogenomics modules

Examples

## Not run: 
app_run2(content = "s")

## End(Not run)

UCSCXenaShiny documentation built on Aug. 8, 2025, 7:19 p.m.