mol_quick_analysis: Quick molecule analysis and report generation
In UCSCXenaShiny: Interactive Analysis of UCSC Xena Data
View source: R/query_general.R
mol_quick_analysis R Documentation
Quick molecule analysis and report generation
Description
Quick molecule analysis and report generation
Usage
mol_quick_analysis(molecule, data_type, out_dir = ".", out_report = FALSE)
Arguments
molecule
a molecular identifier (e.g., "TP53") or a formula specifying
genomic signature ("TP53 + 2 * KRAS - 1.3 * PTEN").
data_type
data type. Can be one of "mRNA", "transcript", "protein",
"mutation", "cnv", "methylation", "miRNA".
out_dir
path to save analysis result and report, default is '.'
out_report
logical value wheather to generate html report
Value
a list.
UCSCXenaShiny documentation built on May 29, 2024, 1:10 a.m.
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View source: R/query_general.R
| mol_quick_analysis | R Documentation |
Quick molecule analysis and report generation
Description
Quick molecule analysis and report generation
Usage
mol_quick_analysis(molecule, data_type, out_dir = ".", out_report = FALSE)
Arguments
molecule |
a molecular identifier (e.g., "TP53") or a formula specifying
genomic signature ( |
data_type |
data type. Can be one of "mRNA", "transcript", "protein", "mutation", "cnv", "methylation", "miRNA". |
out_dir |
path to save analysis result and report, default is '.' |
out_report |
logical value wheather to generate html report |
Value
a list.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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